Bioinformatics Benchmark System 3.0

Grok Headline matches for Bioinformatics Benchmark System 3.0

Bioinformatics.Net

Bioinformatics.Net 05/30/2004 07:49 AM
Bioinformatics.Net
http://www.Bioinformatics.Net

Bioinformatics.Net is an advertising-supported catalog of online biological sciences information, specializing in bioinformatics tools. It serves the needs of molecular biologists and other professionals involved in scientific research, including biotechnology and medicine. This has been added to Biological Informatics Subject Tracer Information Blog.

Breaking into Bioinformatics

Breaking into Bioinformatics 07/08/2004 05:10 PM
When the Xserves arrived for the new Idaho State University bioinformatics lab, says assistant professor of comparative genomics Mike Thomas, “they were up and ready to be used almost immediately.” [Jul 8]

Bioinformatics Detective

Bioinformatics Detective 06/10/2004 04:30 PM
Craig Benham, a mathematical biologist, uses a 38-node cluster of Apple Xserve G5 systems and Mac OS X as a single virtual computing resource to research how a cell uses the information in its genome to produce proteins. [Jun 10]

The Bioinformatics Organization

The Bioinformatics Organization 08/18/2004 05:22 AM
The Bioinformatics Organization
http://bioinformatics.org/

The Bioinformatics Organization, Inc. (Bioinformatics.Org) was founded to facilitate world-wide communications and collaborations between practicing and neophyte bioinformatic scientists and technicians. The Organization provides these individuals, as well as the public at large, free and open access to methods and materials for and from scientific research, software development, and education. We advocate and promote freedom and openness in the field as well as provide a forum for activities which facilitate the development of such resources. This has been added to Biological Informatics Subject Tracer™ Information Blog.

Macs in Bioinformatics

Macs in Bioinformatics 03/14/2005 05:04 PM
We're interested in bioinformatics as one of the fields that our son Sean may pursue in college, so it was interesting to see this article about the use of Macs and XServes in the field. A Perfect X, by John...

Bioinformatics in the Post-Genomic Era

Bioinformatics in the Post-Genomic Era 04/05/2005 05:00 PM

Bioinformatics Award Winners

Bioinformatics Award Winners 09/02/2004 02:10 PM
Meet five people whose breakthroughs make the progress of science real. Chosen from hundreds of applicants to Apple’s Bioinformatics Award Program, they are shaping our health and our world through their research in biotechnology — and the help of Apple’s Workgroup Cluster for Bioinformatics. [Sep 2]

Other News: Bioinformatics Awards

Other News: Bioinformatics Awards 06/30/2004 09:47 AM
Apple announces winners of its 4-node Xserve clusters for bioinformatic research.

The Open Bioinformatics Foundation

The Open Bioinformatics Foundation 11/17/2003 05:33 AM
The Open Bioinformatics Foundation
http://www.open-bio.org

The Open Bioinformatics Foundation is a non profit, volunteer run organization focused on supporting open source programming in bioinformatics. The foundation grew out of the volunteer projects Bioperl, BioJava and Biopython and was formally incorporated in order to handle our modest requirements of hardware ownership, domain name management and funding for conferences and workshops.The Foundation does not participate directly in the development or structure of the open source work, but as the members of the foundation are drawn from the member projects, there is clear commonality of direction and purpose.

Bioinformatics Perl Programmer

Bioinformatics Perl Programmer 02/05/2005 09:24 PM
ACC Staffing - United States, NC, RTP (2005-02-02)

New Perl and Bioinformatics book

New Perl and Bioinformatics book 06/05/2004 12:02 PM
Paul Barry writes "John Wiley & Sons Ltd. has just published my second book. Co-authored with Dr. Michael Moorhouse, Bioinformatics, Biocomputing and Perl is an introduction to bioinformatics computing skills and practice for the student (and ...

Software Developer - Bioinformatics

Software Developer - Bioinformatics 10/28/2003 11:06 PM
Calibrant Biosystems - United States, MD, Rockville (2003-10-22)

Bioinformatics Moves Into the Mainstream

Bioinformatics Moves Into the Mainstream 12/17/2003 02:32 PM
Bioinformatics Moves Into the Mainstream - An Explosion of Data Is Being Tamed with New Systems By Jennifer Ouellette in The Industrial Physicist (Volume 9, Issue 6)
http://www.a ip.org/tip/INPHFA/vol-9/iss-5/p14.html

Genome mappings, those completed and those in progress, have generated a vast amount of biological data, and now more than ever, scientists need sophisticated computational techniques to make sense of it. To meet those ever-increasing needs, bioinformatics is shifting from software designed for a specific project in academic laboratories to the commercial mainstream. Bioinformatics is an interdisciplinary research area loosely defined as the interface between the biological and computational sciences. In practice, the definition is narrower, according to Michael Zuker, a professor of mathematical sciences at Rensselaer Polytechnic Institute (RPI) in Troy, New York. For Zuker and many others, the term applies to the use of computers to store, retrieve, analyze, or predict the composition or structure of biomolecules. These include genetic materials such as nucleic acids, as well as proteins, the end products of genes. ... The need to manage and analyze this data largely drives the current bioinformatics boom. 'Biology is awash in data,' says Eric Jakobsson. 'We cannot exploit the body of data that is currently out there -- we cannot mine it -- without computers, and now we cannot even handle the data in our own individual labs without sophisticated computation.'"

Diverse Sciences Propel Bioinformatics

Diverse Sciences Propel Bioinformatics 08/20/2004 09:56 PM
The obvious methods for understanding how molecular machinery works have already been tried, so new approaches must meld biology, computer science, chemistry, engineering and other disciplines.

Oracle, Infovalley team up for
bioinformatics

Oracle, Infovalley team up for
bioinformatics 04/04/2005 06:46 AM
The Star Online Apr 4 2005 10:49AM GMT

Bioinformatics Toolbox released for
MATLAB

Bioinformatics Toolbox released for
MATLAB 11/10/2003 11:28 PM
The MathWorks on Monday announced the Bioinformatics Toolbox for MATLAB, a Mac OS X compatible product that provides core mathematics and advanced graphical tools for data analysis, visualization and algorithm and application development. Used by engineers and scientists, it has over 500 mathematical, statistical and engineering functions.

Bioinformatics Databases and Tools Guide

Bioinformatics Databases and Tools Guide 05/23/2004 07:41 AM
Bioinformatics Databases and Tools Guide
ht tp://www.agr.kuleuven.ac.be/vakken/i287/bioinformatica.htm

This web site provides an extensive list of links to web resources that would be of interest to those looking for databases and tools in bioinformatics. This has been added to Biological Informatics Subjerct Tracer™ Information Blog.

Feds Launch Bioinformatics Centers

Feds Launch Bioinformatics Centers 08/07/2004 05:32 AM
Feds Launch Bioinformatics Centers By Michael Hardy
http://snipurl.com/88fk

Feds Launch Bioinformatics Centers - Institute contracts for databases and portals to compile info on diseases. Officials at the National Institute of Allergy and Infectious Diseases (NIAID) are enlisting private companies and universities to help make data available about disease-causing organisms. Under eight five-year contracts, companies and academic institutions will develop databases and Web portals to compile information about a small number of pathogens, the germs that cause disease. Some of the pathogens are considered possible bioterrorism agents, while others are public health concerns unrelated to terrorism. With NIAID footing the bill, the data will be freely available to scientists, said Valentina Di Francesco, bioinformatics program director in NIAID's Division of Microbiology and Infectious Diseases. Officials at NIAID, which is part of the National Institutes of Health, have awarded seven Bioinformatics Resource Center (BRC) contracts, and one more is in negotiations, she said. This has been added to Biological Informatics Subject Tracer™ Information Blog.

Workgroup Cluster for Bioinformatics
Video

Workgroup Cluster for Bioinformatics
Video 08/27/2004 05:50 PM
See why scientists are adopting Apple technology when they need the power of high-perfomrance computing. [Aug 27]

Committee Aims to Develop Bioinformatics
Standards

Committee Aims to Develop Bioinformatics
Standards 08/20/2004 02:23 PM
Researchers gather at Stanford University to discuss the development of IEEE-sanctioned standards for bioinformatics.

European Bioinformatics Institute:
Research Groups

European Bioinformatics Institute:
Research Groups 05/02/2004 05:49 AM
European Bioinformatics Institute: Research Groups
http://www.ebi.ac.uk/Groups/
This website features the specialist research groups at the European Bioinformatics Institute (EBI). The EBI's research groups provide "biological data and utilities to aid the scientific community in the understanding of genomic and proteomic data." This site offers a variety of information about numerous research groups including the Computational Genomics Group, Sequence Database Group, Macromolecular Structural Database Group, and Computational Neurobiology Group -- just to name a few. The separate research group web pages vary in content, offering links to such areas as research interests, publications, contact information, funding, projects, and more. This site also links to other sections of EBI including Services, Databases, Downloads, and Submissions. This has been added to Biological Informatics Subject Tracer™ Information Blog. [From The NSDL Scout Report for the Life Sciences, Copyright Internet Scout Project 1994-2003. http://scout.wisc.edu/]

The MathWorks releases Bioinformatics
Toolbox for MATLAB

The MathWorks releases Bioinformatics
Toolbox for MATLAB 11/10/2003 10:59 PM
The MathWorks today announced the availability of its new Bioinformatics Toolbox for MATLAB, an application that facilitates the analysis of complex bioinformatics data, from genomic sequences to microarray data analysis, and speeds up the development and deployment of algorithms...

Bioinformatics Programmer / Computer
Systems Specialist

Bioinformatics Programmer / Computer
Systems Specialist 02/05/2005 09:24 PM
Divergence, Inc. - United States, MO, St. Louis (2005-02-04)

Unified Hyperstructures for
Bioinformatics: Escaping the Application
Prison

Unified Hyperstructures for
Bioinformatics: Escaping the Application
Prison 07/25/2004 05:51 AM
Unified Hyperstructures for Bioinformatics: Escaping the Application Prison by Adam Moore and Tim Brailsford
http://jodi .ecs.soton.ac.uk/Articles/v05/i01/Moore/

Abstract
The Next Big Thing in hypertext will be unifying different applications in bioinformatics through the ZigZag paradigm, allowing this field to live up to its promise of revolutionising the pharmaceutical industry. The paper outlines ZigZag, Ted Nelson's unique hyperstructural paradigm, and illustrates how, by examining a current bioinformatics task such as structure/binding prediction, the application of this novel paradigm has the potential to revolutionise bioinformatics completely by allowing a unified approach to a task currently fulfilled by fragmented data and applications. This has been added to Biological Informatics Subject Tracer™ Information Blog.

A Secure Bioinformatics Linux Lab in an
Educational Research Environment

A Secure Bioinformatics Linux Lab in an
Educational Research Environment 06/16/2004 05:18 AM
How one university department set up labs between campuses.

Apple announces Workgroup Cluster for
Bioinformatics winners

Apple announces Workgroup Cluster for
Bioinformatics winners 06/29/2004 03:46 PM
Apple has announced the winners in its Workgroup Cluster for Bioinformatics Award Program, which sought "five of the most important, innovative and visionary scientific research projects in the U.S."...

Apple names Cluster for Bioinformatics
Award winners

Apple names Cluster for Bioinformatics
Award winners 06/29/2004 01:58 PM
In May, Apple first announced its Apple Workgroup Cluster for Bioinformatics Award Program, which would award Apple Workgroup Clusters to five scientific researchers in the United States. A panel of judges has reviewed the submissions and on Tuesday Apple announced the award winners.

Strand Expands Bioinformatics
Distribution Relationship with UBI in
Canada

Strand Expands Bioinformatics
Distribution Relationship with UBI in
Canada 05/31/2004 01:47 PM
UBI markets avadis, microarray expression analysis software, in Canada. [PRWEB May 27, 2004]

Apple Workgroup Cluster for
Bioinformatics Award Program

Apple Workgroup Cluster for
Bioinformatics Award Program 05/11/2004 02:59 PM
Apple will award five fully-provisioned, all-inclusive Apple Workgroup Clusters for Bioinformatics to five scientific researchers in the United States. Recipients will be announced at Apple’s Worldwide Developers Conference June 29. [May 10]

Workgroup Cluster for Bioinformatics
Award Program announced

Workgroup Cluster for Bioinformatics
Award Program announced 05/11/2004 02:02 AM
Apple's Hot News page has noted the Apple Workgroup Cluster for Bioinformatics Award Program, where the company will "award five fully-provisioned, all-inclusive Apple Workgroup Clusters for Bioinformatics to five scientific researchers in the United States...

VIA AES Benchmark

VIA AES Benchmark 05/20/2004 10:08 AM

Far Cry Benchmark

Far Cry Benchmark 07/20/2004 04:07 PM

Far Cry Benchmark 1.2

Far Cry Benchmark 1.2 07/23/2004 04:21 PM

XML Benchmark

XML Benchmark 02/10/2004 01:26 PM
New Results Published

3DX: Benchmark

3DX: Benchmark 04/27/2004 03:59 PM
New Website

PHP Benchmark

PHP Benchmark 11/18/2003 10:13 PM
Sebastian is doing some neat work on testing performance. I found it hard to decipher the data, so I graphed it in Excel.

There seems to be some drop-off in performance in PHP 4.3.4. I guess the core developers are putting their energies into PHP 5.

XML Benchmark 1.3.0

XML Benchmark 1.3.0 02/10/2004 02:55 PM
A C/C++/Java XML parsers benchmarking tool set.

XML Benchmark 1.2.2

XML Benchmark 1.2.2 10/29/2003 12:11 AM
A C/C++/Java XML parsers benchmarking tool set.

U of Minnesota Funds Bioinformatics
Center with $5M from Microsoft Antitrust
Settlement

U of Minnesota Funds Bioinformatics
Center with $5M from Microsoft Antitrust
Settlement 03/14/2005 06:00 PM
GenomeWeb Mar 14 2005 3:06PM GMT
Grok Description matches for Bioinformatics Benchmark System 3.0
GrokA matches for Bioinformatics Benchmark System 3.0

Bioinformatics Benchmark System 3.0